BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032B06SP1|AL429518
(876 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1674 1709 0.0
>3x_Contig1674
Length = 12281
Score = 1709 bits (860), Expect = 0.0
Identities = 870/874 (99%), Gaps = 1/874 (0%)
Strand = Plus / Minus
Query: 4 aatccgtagacatatttgaaaagaatcactccttattcgaagttaacggtcctaaacgta 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6025 aatccgtagacatatttgaaaagaatcactccttattcgaagttaacggtcctaaacgta 5966
Query: 64 ttaagtactatttctccagagaagcgatgtccaaaaactttgataataccatcgaccata 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5965 ttaagtactatttctccagagaagcgatgtccaaaaactttgataataccatcgaccata 5906
Query: 124 ttatttggaagtcaagaggaacgcgtttatggagcacattagctccagggctactgatgt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5905 ttatttggaagtcaagaggaacgcgtttatggagcacattagctccagggctactgatgt 5846
Query: 184 tcactgtccaatatgctacactgttgataacaggcgatgcttcttggccatatttattgc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5845 tcactgtccaatatgctacactgttgataacaggcgatgcttcttggccatatttattgc 5786
Query: 244 tagctgcgatttcttattttgtattaagaagtgtaaaggccactgtgtactggatcawcg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 5785 tagctgcgatttcttattttgtattaagaagtgtaaaggccactgtgtactggatcatcg 5726
Query: 304 ttttctgttacctaaactattcaacttaaaagcgaasc-aatcttaatttattataacga 362
|||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 5725 ttttctgttacctaaactattcaacttaaaagcgaagccaatcttaatttattataacga 5666
Query: 363 cttgtgcaaaatatatacacatacccctcaaagttaagagatgaaaaacagacgttaaca 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5665 cttgtgcaaaatatatacacatacccctcaaagttaagagatgaaaaacagacgttaaca 5606
Query: 423 agctattaagtttctaaatattacactaattaactcttcctccatatccatttacaccaa 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5605 agctattaagtttctaaatattacactaattaactcttcctccatatccatttacaccaa 5546
Query: 483 attgaacaccaggttgatttgaattgcttcgactttgagtattaaccggtgagcctattg 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5545 attgaacaccaggttgatttgaattgcttcgactttgagtattaaccggtgagcctattg 5486
Query: 543 tttgctgcatcaacttagaagccgtatctagttgagcactggcgtcttccattcttttct 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5485 tttgctgcatcaacttagaagccgtatctagttgagcactggcgtcttccattcttttct 5426
Query: 603 tctgcaggagtttctgttgctgttgttgcattattagctgttgagtttgaatatcccgag 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5425 tctgcaggagtttctgttgctgttgttgcattattagctgttgagtttgaatatcccgag 5366
Query: 663 gggtgatgccctgggtcatcatgggttgttgccctgcaggttttccagcctgaactgact 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5365 gggtgatgccctgggtcatcatgggttgttgccctgcaggttttccagcctgaactgact 5306
Query: 723 gtggaatttgcatttgcatttgagataacgatccggtagcactagattgtcgttgccgct 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5305 gtggaatttgcatttgcatttgagataacgatccggtagcactagattgtcgttgccgct 5246
Query: 783 gttgttgttgctgttgttgctgctgctgctgctgttgttgtttcaaacgttgggcctgtw 842
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5245 gttgttgttgctgttgttgctgctgctgctgctgttgttgtttcaaacgttgggcctgta 5186
Query: 843 atatttgaagctgttctggtgtcaagttttgagg 876
||||||||||||||||||||||||||||||||||
Sbjct: 5185 atatttgaagctgttctggtgtcaagttttgagg 5152
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8693
Number of Sequences: 1807
Number of extensions: 8693
Number of successful extensions: 849
Number of sequences better than 1.0e-20: 1
length of query: 876
length of database: 10,358,551
effective HSP length: 16
effective length of query: 860
effective length of database: 10,329,639
effective search space: 8883489540
effective search space used: 8883489540
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)